PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005335.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 692aa MW: 75942.1 Da PI: 6.5986

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005335.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.2	3.1e-23	123	224	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF + +++ Oeu005335.1 123 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFL--RAENGD 216 89**************************996555555..89*******************************************..448888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++r+ Oeu005335.1 217 LCIGIRRA 224 9**996 PP
2	Auxin_resp	106.5	3.1e-35	289	372	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a ++++Fevv++Prast+e+ vk++ v++al++++ GmRfkmafetedss++++ +Gt+++v+ +dp+rWp+S+Wr+L+ Oeu005335.1 289 AATLAVSGQPFEVVFYPRASTPEYFVKASLVKAALQTQWFSGMRFKMAFETEDSSRISWfMGTISSVHVADPIRWPDSPWRLLQ 372 6788999***************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MITFIESKEK MKEHEKCLDS QLWHACAGSM VQMPPVNSKV FYFPQGHAEH ASGNVDFRSC 60 PRVPAYIICT VSAIKFMADP ETDEVFSKIR LIPVNGNEAD FDEGGVGVGG INVSDNPDKP 120 TSFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYSADPPV QTILAKDVHG ETWKFRHIYR 180 GTPRRHLLTT GWSTFVNHKK LVAGDSIVFL RAENGDLCIG IRRAKRGIDG GLETPSLWNP 240 AGGSCVVPYG GFSDLLREED NRLTRNGSGN AGRNLIVRGR VKPESVIEAA TLAVSGQPFE 300 VVFYPRASTP EYFVKASLVK AALQTQWFSG MRFKMAFETE DSSRISWFMG TISSVHVADP 360 IRWPDSPWRL LQVIWDEPDL LQNVKRVSPW LVELVSNMPT IHLSPFSSPR KKLRLPQHPD 420 FLLDGQLPLS VFSGNQVLGS SNPFGCLPDN TPAGMQGARH AQYGLSLPDL HLNKLQSGLF 480 PVDFMPLDRA SVHMGASNLI LPKLGNNENV SCLLTMGSSN QVSKRTDNRK AGQFLLFGCP 540 ILTEQQISLS CSGDTVSTIG TGNSSSDGNA DKIGNTSDGS GSALNQHGAP ERSCEGFHLE 600 LNPETGHCKV FMESEDVGRT LDLSLLSSYE ELYGKLENMF GVDISEMLTH ILYWDVTGAE 660 RKLGDKPFSD FMKTARRLKI LSDSSTNNVV M*

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MITFIESKEK MKEHEKCLDS QLWHACAGSM VQMPPVNSKV FYFPQGHAEH ASGNVDFRSC  60
PRVPAYIICT VSAIKFMADP ETDEVFSKIR LIPVNGNEAD FDEGGVGVGG INVSDNPDKP  120
TSFAKTLTQS DANNGGGFSV PRYCAETIFP RLDYSADPPV QTILAKDVHG ETWKFRHIYR  180
GTPRRHLLTT GWSTFVNHKK LVAGDSIVFL RAENGDLCIG IRRAKRGIDG GLETPSLWNP  240
AGGSCVVPYG GFSDLLREED NRLTRNGSGN AGRNLIVRGR VKPESVIEAA TLAVSGQPFE  300
VVFYPRASTP EYFVKASLVK AALQTQWFSG MRFKMAFETE DSSRISWFMG TISSVHVADP  360
IRWPDSPWRL LQVIWDEPDL LQNVKRVSPW LVELVSNMPT IHLSPFSSPR KKLRLPQHPD  420
FLLDGQLPLS VFSGNQVLGS SNPFGCLPDN TPAGMQGARH AQYGLSLPDL HLNKLQSGLF  480
PVDFMPLDRA SVHMGASNLI LPKLGNNENV SCLLTMGSSN QVSKRTDNRK AGQFLLFGCP  540
ILTEQQISLS CSGDTVSTIG TGNSSSDGNA DKIGNTSDGS GSALNQHGAP ERSCEGFHLE  600
LNPETGHCKV FMESEDVGRT LDLSLLSSYE ELYGKLENMF GVDISEMLTH ILYWDVTGAE  660
RKLGDKPFSD FMKTARRLKI LSDSSTNNVV M*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein