PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu005403.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 173aa MW: 19694.4 Da PI: 8.9397

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu005403.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	120.9	5.9e-38	59	135	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +C v++Ce+dl +k+y++rhkvCevhskap+v+vsg++qrfCqqCsrf e+sefD++krsCr rLa+hn+rrrk++ Oeu005403.1 59 CCAVDKCEVDLRACKKYYQRHKVCEVHSKAPEVIVSGVRQRFCQQCSRFQEVSEFDQTKRSCRMRLAGHNQRRRKSS 135 6**************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MKIKKMLEDK ENGFEEEEEM AEEDEMVENE SNLKKKRLDL GGGGSGMSAR AGGEVAPPCC 60 AVDKCEVDLR ACKKYYQRHK VCEVHSKAPE VIVSGVRQRF CQQCSRFQEV SEFDQTKRSC 120 RMRLAGHNQR RRKSSSRLVK RAQTTEDSRK TSPGSLMDFS EKKSYKIAWM SL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	134	QRRRKS
2	130	166	RRRKSSSRLVKRAQTTEDSRKTSPGSLMDFSEKKSYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	3e-20	SBP family protein