PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu005578.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 821aa    MW: 91659.5 Da    PI: 6.351
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu005578.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.81e-23121222199
                  EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                  f+k+lt sd++++g +++ +++a+e+      ++++++ ++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el
  Oeu005578.1 121 FCKTLTASDTSTHGGFSVLRRHADEClppldmSLQPPT-QELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGEL 215
                  99*****************************9777665.59************************************************..449999* PP

                  EEEEE-S CS
           B3  93 vvkvfrk 99 
                  +v+v+r+
  Oeu005578.1 216 RVGVRRA 222
                  ****996 PP
2Auxin_resp114.69.2e-38247329183
   Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                  a+ha++tk++F+v+Y+Pr+s+seF+v+++++++++k+++ +Gm+fkm+fe+e+++e+r++Gt+vg++++d+ rWp+SkWr+Lk
  Oeu005578.1 247 AMHAIQTKTIFTVYYKPRTSPSEFIVPFDQYMESVKNNYLIGMKFKMRFEGEEAPEQRFTGTIVGIEASDSRRWPQSKWRCLK 329
                  78*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 821 aa     Download sequence    
MGISGIGKVD AETALYTELW KACAGPLVTV PRENELVFYF PQGHIEQVEA STNQSADQQM  60
PVYNLPPKIL CRVVNVLLKA EPDTDEVFAH VILMPEPYQD ENAVKKEPLP PTPPCFHVHS  120
FCKTLTASDT STHGGFSVLR RHADECLPPL DMSLQPPTQE LVAKDLHGNE WRFRHIFRGQ  180
PRRHLLQSGW SVFVSSKRLV AGDAFIFLRG ENGELRVGVR RAMRQEGNAP SSVISCHSMH  240
LGVLATAMHA IQTKTIFTVY YKPRTSPSEF IVPFDQYMES VKNNYLIGMK FKMRFEGEEA  300
PEQRFTGTIV GIEASDSRRW PQSKWRCLKV RWDEMSTISR PERVSPWEIE PSLSPPALNP  360
LPVPRPKRPR SNVLPVSSDS SVLTRESSAK MTVDPSPASG FPMVFQGQEL SILKGTFSES  420
NESDSSEKPM LWPPSSDEEK IEHVSSSRRY GSDKWLPLGR PESSFTDLLS GFGSQYNLSR  480
EFSLPSGNTA VSKQQVEERE EKFCLIGNAW SMIPSCLSLN LMDTGMKTHG QGPDASYHTQ  540
GDIRCSGGLR EYSMLPDHRD GNKHVNWLMP PPNSPYLQIT PGQSRELQPN SVFAQRDTTK  600
PKEGNCKLFG VPLISGSVPT EQELLHTNAM IETSRVHGVM HSHQSPALAS DQRSDQSKGL  660
KMADNPVASE QDKHFQTCHP LAREREGKGV SGSTRSCTKV HKQGAALGRS VDLAKFNNYD  720
ELTADLDNIF EFNGELKAPN KNWLVVYTDD EDDMMLVGDD PWEEFCSMVH KILICTKDEV  780
QRMNWGTINS REEISSVAGG LDAKETKNLQ VAQGSSPENY *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein