PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu005781.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 203aa    MW: 21737.7 Da    PI: 7.9497
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu005781.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260129.71.3e-40121121100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 
                  +C aCk+lrrkC+k+C++apyf ++q +++fa+vhk+FGasn +k+l ++p+++r da+ +l+yeA ar++dPvyG+vg+i++lqqq+ +l+aela++
  Oeu005781.1  12 PCGACKFLRRKCVKGCIFAPYFDSDQgTAHFAAVHKVFGASNASKMLLRIPPHKRLDAVVTLCYEALARVKDPVYGCVGHIFTLQQQVVNLQAELAYI 109
                  7***********************9989********************************************************************99 PP

       DUF260  98 kee 100
                  +++
  Oeu005781.1 110 QAR 112
                  876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MSGGQNGSGG GPCGACKFLR RKCVKGCIFA PYFDSDQGTA HFAAVHKVFG ASNASKMLLR  60
IPPHKRLDAV VTLCYEALAR VKDPVYGCVG HIFTLQQQVV NLQAELAYIQ ARISTLHRLP  120
PPPPPQPPSL SSSNIQSSSG LVCSSNIMTH FDTSQSEETS TEMASFCNAV DEGLEDGDLQ  180
SLARDYVSRC LNGIKFRPST SQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.12e-67LBD family protein