PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu005814.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family YABBY
Protein Properties Length: 212aa    MW: 23589 Da    PI: 7.8538
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu005814.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY237.23.6e-73121752170
        YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvs 97 
                  ++ s seq+Cyv+CnfC+t+lavsvP t lfk+vtvrCGhCt+llsvn++ +   ++ + h+++s+  +  llee +++ +nl  n+ + +++     
  Oeu005814.1  12 HHLSPSEQLCYVHCNFCDTVLAVSVPCTILFKTVTVRCGHCTNLLSVNMRGMLLPTSNQLHFGHSFFSPqnLLEEIRNSPSNLLINQPNPNESL---- 105
                  68899*****************************************999999999999999999987654578888888887777665544433.... PP

        YABBY  98 seklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     ++    ee+p++p ++rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl
  Oeu005814.1 106 ---MPIRGIEELPKPPVANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 175
                  ...35566899***999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MSSSSAFTPD HHHLSPSEQL CYVHCNFCDT VLAVSVPCTI LFKTVTVRCG HCTNLLSVNM  60
RGMLLPTSNQ LHFGHSFFSP QNLLEEIRNS PSNLLINQPN PNESLMPIRG IEELPKPPVA  120
NRPPEKRQRV PSAYNRFIKD EIQRIKAGNP DISHREAFSA AAKNWAHFPH IHFGLMPDQP  180
VKKTNVCQQE GEDVLMKDGF LAPANVGVSP Y*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.12e-97YABBY family protein