PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu005957.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 141aa    MW: 15968.2 Da    PI: 7.0417
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu005957.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB120.76.6e-38190897
        NF-YB  8 lPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                 +P +n+ +im+  lP++aki++dak+ +qecvs fi  vt+ea+ +c++e+r+ti+g+dl+ a+++lG+++y+epl+ yl+kyre e +k
  Oeu005957.1  1 MPTTNMLKIMRSGLPEHAKIANDAKDKMQECVSSFIRVVTNEANLRCHQEHRRTITGEDLIVAMGKLGLDNYIEPLTCYLSKYREHEFQK 90
                 799**********************************************************************************99765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MPTTNMLKIM RSGLPEHAKI ANDAKDKMQE CVSSFIRVVT NEANLRCHQE HRRTITGEDL  60
IVAMGKLGLD NYIEPLTCYL SKYREHEFQK KSLPGERYKK RNVSFVQPQI TPQPPVQVVP  120
LDYAWDMPID DSPDGHGEGS *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21970.17e-35NF-YB family protein