PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu006242.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 302aa MW: 33604.2 Da PI: 7.0241

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu006242.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.2	3.4e-14	91	142	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ Oeu006242.1 91 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKDLE 142 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MALEALSSNE LLNFVIYDSI SSTPYSCNDS SDAISLLPQA NVVGCSSMPP PSHPPEATET 60 TQKPPEFTVQ GRKKRRRRPK VCKNKEEAET QRMTHIAVER NRRKQMNEHL AVLRSLMPES 120 YVQRGDQASI VGGAIEFVKD LEHVLQSLEA KKFVLQQAAT AETGDANDHT HGSNKMLKIN 180 PFAQFFSHPQ FSCSNLHNNY TSQNSAAIAE IEVTLIETHA NMRILSHRRF RQHSKIIVSA 240 FQAMFLSILH LNVTTLDPLV LYSISAKVEE GCQLNSADEI AGAVHHMLRI IEEEAILCCL 300 S*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	78	RKKRRRR
2	73	78	KKRRRR
3	92	103	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-71	bHLH family protein