PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006447.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family CAMTA
Protein Properties Length: 286aa    MW: 32425.3 Da    PI: 6.4463
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006447.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1143.46.1e-45301793118
         CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg...................... 77 
                  +e k+rwl+++ei+aiL n++ +++  ++ + pksg++ L++rkk+r+fr+DG++wkkkkdg+tv+E+he+LK                         
  Oeu006447.1  30 EEgKTRWLRPNEIHAILCNYKYFSINVKPLNLPKSGTIELFDRKKLRNFRNDGHNWKKKKDGRTVKEAHEHLKHICigdsinlqpgnllhgytgtmvl 127
                  5559*********************************************************************776778******************* PP

         CG-1  78 ...........vevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118
                              e +++yYah+e+n+tf rrcywlL+++le+ivlvhy+e++
  Oeu006447.1 128 ftptimemvgnDERIHVYYAHGEDNQTFVRRCYWLLDKSLEHIVLVHYRETQ 179
                  ********9999*************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MQSGVPGPLA GSEIHGFLTM ADLDIGDIME EGKTRWLRPN EIHAILCNYK YFSINVKPLN  60
LPKSGTIELF DRKKLRNFRN DGHNWKKKKD GRTVKEAHEH LKHICIGDSI NLQPGNLLHG  120
YTGTMVLFTP TIMEMVGNDE RIHVYYAHGE DNQTFVRRCY WLLDKSLEHI VLVHYRETQE  180
LQGSPATPVN SNSSAVSDPS APRPLSEESD STVDRAYYSR SQLENNDSTT MKNHEQRLHE  240
INTLEWDELL VSVDPNKPIT PQEGKTSGFD LQNQCQMSSY KTNSG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17289RKKLRNFRNDGHNWKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16150.13e-87CAMTA family protein