PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu006523.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 456aa MW: 49274 Da PI: 7.5686

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu006523.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.9	1.9e-40	171	248	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC++dls ak+yhr+h+vC+ hsk+p+v+v gle+rfCqqCsrfh +sefDe+krsCrrrL++hn+rrrk+q+ Oeu006523.1 171 RCQVEGCNMDLSAAKDYHRKHRVCNSHSKCPKVIVGGLERRFCQQCSRFHGVSEFDEKKRSCRRRLSDHNARRRKPQQ 248 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MEYTKWDWEN FVAFGSKASD SPKKVQSADW MIMDDGEISF NLSGGSGNSG GSGSEVHGSS 60 AECSISVSTD SLPEDRMKNP NFKFEAFEGP AGDFSKNIVS IRNEVSGTSP LETSVGSAEP 120 LIGLKLGKRM YFENSSAGGS IKSASFTVVP SSSISITKKS KSSPPNGLIP RCQVEGCNMD 180 LSAAKDYHRK HRVCNSHSKC PKVIVGGLER RFCQQCSRFH GVSEFDEKKR SCRRRLSDHN 240 ARRRKPQQET IQFNSGGLTS PFYDGRAKMN FFLNNAPLVH SRTATNSASG STCSSKFTLT 300 EVFPLKPDKA GGLDGQVHMP GIQPAHTISM HDNLLNGSTS EVLNPGSKGS IFSSHLDAAP 360 GHHCALSLLS SNSWGSCEPE SIILNNPINE SGTSVPQPVM HAIPEGLPFT SAEFWQTAQQ 420 PTHPSVHALP QNGTFQEIQL FKAPYEADFY SNVLN*

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MEYTKWDWEN FVAFGSKASD SPKKVQSADW MIMDDGEISF NLSGGSGNSG GSGSEVHGSS  60
AECSISVSTD SLPEDRMKNP NFKFEAFEGP AGDFSKNIVS IRNEVSGTSP LETSVGSAEP  120
LIGLKLGKRM YFENSSAGGS IKSASFTVVP SSSISITKKS KSSPPNGLIP RCQVEGCNMD  180
LSAAKDYHRK HRVCNSHSKC PKVIVGGLER RFCQQCSRFH GVSEFDEKKR SCRRRLSDHN  240
ARRRKPQQET IQFNSGGLTS PFYDGRAKMN FFLNNAPLVH SRTATNSASG STCSSKFTLT  300
EVFPLKPDKA GGLDGQVHMP GIQPAHTISM HDNLLNGSTS EVLNPGSKGS IFSSHLDAAP  360
GHHCALSLLS SNSWGSCEPE SIILNNPINE SGTSVPQPVM HAIPEGLPFT SAEFWQTAQQ  420
PTHPSVHALP QNGTFQEIQL FKAPYEADFY SNVLN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	245	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	3e-64	SBP family protein