PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu006743.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 336aa MW: 37587.4 Da PI: 9.2435

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu006743.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	46.9	7.4e-15	56	143	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Liea e+ +l+rg+lk+++W++v++ + +++ + ++pk qCk++++ ++k+yk +k+ + + s+++++++++ Oeu006743.1 56 CWSEGATAVLIEAWGERYLELSRGNLKQKHWKDVADIVgSREDYMKTPKtdvQCKNRIDTVKKKYKTEKAKIAAG--GGPSKWRFYEKMD 143 7***********************************955666655543339**************9997..67778*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MEDDDEIQSH PSPPSNGRIT VTVAAAPPMT PQNTLTLALP IQQQKVGGTG GGREDCWSEG 60 ATAVLIEAWG ERYLELSRGN LKQKHWKDVA DIVGSREDYM KTPKTDVQCK NRIDTVKKKY 120 KTEKAKIAAG GGPSKWRFYE KMDELIGPTA KMSSVQSGSQ KVPMGIPVGT RSGSVSQFRQ 180 QPKPQFRKRP PVESDEESEQ EPEPSADSSD GLPPECYKRP RVKKETNQMM MVNASAPMSG 240 MMNRSAAAVV NSNETNWGNS VGELTRAILK FGESYEQAEN SKMQQLVEME KQRMKFVKEM 300 ELQRMQFFMK TQLELSQLKN NRNYHRTTNN TDSSN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	2e-60	Trihelix family protein