PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006937.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 150aa    MW: 17058.7 Da    PI: 8.4634
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006937.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.35.6e-08223425
                 ---SGGGGTS--TTTTT-SS-S CS
      zf-CCCH  4 elCrffartGtCkyGdrCkFaH 25
                 ++C+ f+ +++C+yG++CkF H
  Oeu006937.1  2 KICNLFYNGHECRYGEKCKFLH 23
                 68******************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MKICNLFYNG HECRYGEKCK FLHERLMKFM TDISRQKRAR VVESIGATWP DLINKKDYAQ  60
PDYNLQSPGA RVETELIMNT GLKIPEEPLP IPVIGSSHAT AVIVAPANKD AERKKWKLDR  120
QVKGIYADWL DVFLPHHYSP SEEFISVGA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19360.12e-09C3H family protein