PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006972.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 293aa    MW: 32864.2 Da    PI: 10.2182
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006972.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.93.3e-19160193134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C+ C+ttkTplWR+gp g+k+LCnaCG+++rk +
  Oeu006972.1 160 CADCNTTKTPLWRSGPKGPKSLCNACGIRQRKAR 193
                  *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MTPMILNSSP IVLERNEEHD DQHPLLSGAN HQIASSSSLS CHYFFNPTLD QAKFYRHEFY  60
RPQQHQKDVN YAYDSGHKLT LWKKENPSES VLENNNSPVK WMSSKMRLMH KMQNSDRVSL  120
KITNNETKKL ENRQKQTSSS LETDLSRNSS SNNNNPIRVC ADCNTTKTPL WRSGPKGPKS  180
LCNACGIRQR KARRAMAAAS ADDANGMAIT TEPSPKKIKV HHKDKISKNR HAAHLKKHCK  240
ITAGPSNDKK KLGFEDFLIN LSKNSAFNQV FPQDEKDAAI LLMALSSGLV PG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.18e-34GATA family protein