PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006988.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 215aa    MW: 23928.3 Da    PI: 4.8717
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006988.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.84e-055476123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ C + F++   L  H+++H
  Oeu006988.1 54 YTCHFCRREFRSAQALGGHMNVH 76
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MWNNDDNNND NNNNNNNKVH PTGENEVDSW EVRAFEEDIT AGNQMGCTWP PLSYTCHFCR  60
REFRSAQALG GHMNVHRRDR ARLHQQLLMF PSSSSNDFPK SPDSTILVPN QEFLPNGLCL  120
SYSIPKLNGV FAQNLPSTTN ILSVSPNHPL PTDMPGEAAH SVNPLLLCHE YSSKTQPSSF  180
ISNDNNNQGN ESDRDSAIEE IDLELRLGRG LPTP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.11e-32C2H2 family protein