PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu007079.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 422aa    MW: 47254.1 Da    PI: 7.1259
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu007079.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS341.91.1e-104384181374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l+elLl+cA + ssg+l+ a+a+L ++ ++as +gd+mqRl a f+ ALaarl++ +++lykal+ ++ +     +   a ++f + +P++ f++ + 
  Oeu007079.1  38 LIELLLSCAGHTSSGNLHHADACLRQILQHASINGDSMQRLSARFVSALAARLVKRWPGLYKALNNTKPA---RHDLDRAWSIFTQQFPCMAFAYSII 132
                  689*************************************************************999998...4555567788*************** PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                   q + + +++e+ +HiiD++ + +  W++++q L   p ++pp+lRiT vg+    +k + e++g rL k Ae+l++pf+fn+ v  +l++l+l++L+
  Oeu007079.1 133 KQVLIQVMSHERIIHIIDLGSGDPNLWVPFIQGLGHVPdGPPPHLRITFVGQ----NKVAQENIGARLVKEAESLDLPFQFNP-VNVSLTELTLDMLK 225
                  ***********************************99967778*********....99*************************.6889********** PP

         GRAS 196 vkpgEalaVnlvlqlhrll..............desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                  vk+gEala  ++ +lh ll              ++ v+ +++ +e+L +vks+sPkvv +veqe+dhn+ ++++rf+eal+yysa fds+++ +++ s
  Oeu007079.1 226 VKSGEALALISISSLHALLaeddrvnshfgsskNNGVKDSKQMNEFLAMVKSMSPKVVLLVEQESDHNHYRLVDRFVEALHYYSAWFDSISVAYGEFS 323
                  *******************************98777777778899***************************************************** PP

         GRAS 280 .eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                    +r+++E + +g+ei+n+va eg er++rhe+++kW  r++ aGFkpv+l + ++++a+ +++ ++ +gy++ ++++sl+++W+drp+++vSaW+
  Oeu007079.1 324 cTDRTMLEDM-FGNEIENIVAGEGLEREKRHERYAKWMVRFGGAGFKPVRLWSGIMDEARIVVEAHGLKGYKIVNQKASLMICWHDRPIYAVSAWT 418
                  8888888888.************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MSSSFPSQNP EVTLSLSLQS IPTNRSEDVN PEERGIKLIE LLLSCAGHTS SGNLHHADAC  60
LRQILQHASI NGDSMQRLSA RFVSALAARL VKRWPGLYKA LNNTKPARHD LDRAWSIFTQ  120
QFPCMAFAYS IIKQVLIQVM SHERIIHIID LGSGDPNLWV PFIQGLGHVP DGPPPHLRIT  180
FVGQNKVAQE NIGARLVKEA ESLDLPFQFN PVNVSLTELT LDMLKVKSGE ALALISISSL  240
HALLAEDDRV NSHFGSSKNN GVKDSKQMNE FLAMVKSMSP KVVLLVEQES DHNHYRLVDR  300
FVEALHYYSA WFDSISVAYG EFSCTDRTML EDMFGNEIEN IVAGEGLERE KRHERYAKWM  360
VRFGGAGFKP VRLWSGIMDE ARIVVEAHGL KGYKIVNQKA SLMICWHDRP IYAVSAWTCF  420
S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-98GRAS family protein