PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007116.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

WRKY

Protein Properties

Length: 538aa MW: 58467 Da PI: 6.7351

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007116.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.2	1.1e-30	263	321	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Oeu007116.1 263 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 321 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MEQFPVNLLA SDEKRKVLNE MDFFAEKKDD DELKIGTSDE GDAKGKELDF NVNTGLHLLT 60 ANTSSDQSVV DDGISPNSED KRSKTEMVVL RAEMERMNSE NRCLKDTLNQ VRNNYNTLQM 120 HLLTLMQQQE RDHQRAHDDN GITEEHGQKL VDDNNKQRKN DKGLVLPRQF MDLGLAAETD 180 EASLSSSEGR SCQNRSRSPV NNIDGMLKEI GREEISDKGS QGWGPNKVPR LNHSPKSVDE 240 AAEATMRKAR VSVRARSEAP MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AAGCPVRKQV 300 QRCAEDRTIL ITTYEGNHNH PLPPAAMAMA STTSSAARML LSGSMPSADG LINSNFLART 360 LFPCSSSMAT ISASAPFPTV TLDLTQTPNL SQFPRSQNQF QIPFPNAGQS FPNNPAALLP 420 QIFGQALYNQ SKFSGLQTSQ DMEGGHQATP SLPAAMQQGQ QNQLAGTMNA LAADPNFTAA 480 LAAAITSLIG NSHPNNANNT HTNVVATTTS NNGGSVSTSN NNSNGNNKVS SSSFPVN*

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MEQFPVNLLA SDEKRKVLNE MDFFAEKKDD DELKIGTSDE GDAKGKELDF NVNTGLHLLT  60
ANTSSDQSVV DDGISPNSED KRSKTEMVVL RAEMERMNSE NRCLKDTLNQ VRNNYNTLQM  120
HLLTLMQQQE RDHQRAHDDN GITEEHGQKL VDDNNKQRKN DKGLVLPRQF MDLGLAAETD  180
EASLSSSEGR SCQNRSRSPV NNIDGMLKEI GREEISDKGS QGWGPNKVPR LNHSPKSVDE  240
AAEATMRKAR VSVRARSEAP MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AAGCPVRKQV  300
QRCAEDRTIL ITTYEGNHNH PLPPAAMAMA STTSSAARML LSGSMPSADG LINSNFLART  360
LFPCSSSMAT ISASAPFPTV TLDLTQTPNL SQFPRSQNQF QIPFPNAGQS FPNNPAALLP  420
QIFGQALYNQ SKFSGLQTSQ DMEGGHQATP SLPAAMQQGQ QNQLAGTMNA LAADPNFTAA  480
LAAAITSLIG NSHPNNANNT HTNVVATTTS NNGGSVSTSN NNSNGNNKVS SSSFPVN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-121	WRKY family protein