PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007124.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 400aa MW: 44848.5 Da PI: 7.6046

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007124.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.7	3.6e-06	37	65	4	32
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClle 32 +C++++++++ C dC+ lC C + Oeu007124.1 37 LICDKCHSQPAVVRCMDCKLSLCSGCDWN 65 68************************865 PP
2	CCT	62.9	1e-21	343	386	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RY+eK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ Oeu007124.1 343 RDKAKMRYNEKKKTRMFGKQIRYASRKARADTRKRVKGRFVKAG 386 899**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MATAVIYCKT DSARLCLQCD GRVHFENSLS QRHPRSLICD KCHSQPAVVR CMDCKLSLCS 60 GCDWNGNGCL GPDHRRLKLN FYCGCPSLAE FCKIWSLVLD EPKSSSYDRT TSTTNENSMN 120 TAQNDRGDGG MVAIRLNELT SPSPLFQSNI PNYISSLYNA NQKPLLYNDQ MTFFSEGSSF 180 QKGFPNSIKD LGLRDSDDLC DNVDMDNMAL SFYSGYQMFE NLQNQPSYHY DDGGMSSLVT 240 EKNFSVTESN RHQECRGFQS SQIGICSTNL VQPINNATAN CMLMHPNCTS NNIGLRFPCG 300 QLPSTVSTAG RVADFQDCEL SPIFLAGDAP WELNFEGNCQ QARDKAKMRY NEKKKTRMFG 360 KQIRYASRKA RADTRKRVKG RFVKAGEAYD YDPLVVRDF*

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MATAVIYCKT DSARLCLQCD GRVHFENSLS QRHPRSLICD KCHSQPAVVR CMDCKLSLCS  60
GCDWNGNGCL GPDHRRLKLN FYCGCPSLAE FCKIWSLVLD EPKSSSYDRT TSTTNENSMN  120
TAQNDRGDGG MVAIRLNELT SPSPLFQSNI PNYISSLYNA NQKPLLYNDQ MTFFSEGSSF  180
QKGFPNSIKD LGLRDSDDLC DNVDMDNMAL SFYSGYQMFE NLQNQPSYHY DDGGMSSLVT  240
EKNFSVTESN RHQECRGFQS SQIGICSTNL VQPINNATAN CMLMHPNCTS NNIGLRFPCG  300
QLPSTVSTAG RVADFQDCEL SPIFLAGDAP WELNFEGNCQ QARDKAKMRY NEKKKTRMFG  360
KQIRYASRKA RADTRKRVKG RFVKAGEAYD YDPLVVRDF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	7e-79	CO-like family protein