PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007427.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 1036aa MW: 114760 Da PI: 6.123

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007427.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.8	1e-23	126	226	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae++ ++++++ ++l+ +d++++sW++++iyr++++r++lt+GW+ Fv++++L +gD+v+F + +++ +l Oeu007427.1 126 FCKTLTASDTSTHGGFSVPRRAAEKIfplldfSMQPPS-QELVAKDLHNQSWTFRHIYRGQPKRHLLTTGWSVFVSSKRLAAGDSVLFIR--DEKSQL 220 99***************************9656554.59**********************************************4..466667 PP EEEEE- CS B3 93 vvkvfr 98 +++++ Oeu007427.1 221 FLGIRH 226 888875 PP
2	Auxin_resp	123.9	1.1e-40	252	334	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv++++k++ka++++vs+GmRf+m+fete+s rr++Gt++g+ dldpvrW+nS+Wr+L+ Oeu007427.1 252 AAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGIGDLDPVRWKNSQWRNLQ 334 79*******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1036 aa Download sequence
MKVASNGYMA NPGEGGKILI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE 60 ADSIPSYPNL PSKLICRLHS VTLHADTETD EVYAQMTLQP VSNYDQEALL LSEMGLKQSR 120 QPSEFFCKTL TASDTSTHGG FSVPRRAAEK IFPLLDFSMQ PPSQELVAKD LHNQSWTFRH 180 IYRGQPKRHL LTTGWSVFVS SKRLAAGDSV LFIRDEKSQL FLGIRHATRQ QPAISSSVIS 240 SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYNKAMYTQV SLGMRFRMMF 300 ETEESGVRRY MGTITGIGDL DPVRWKNSQW RNLQVGWDES TAGERPSRVS IWEIEPVVTP 360 FYICPPPFFR PKFSKQPGFP DDDADIENIF KRGMPWIADE FGLKDTSSSI FPGLSLVQWM 420 NMQQNQQFSA NQSGLFPNMV SSANLHGNLG TDDRSKLLNF QSPAFASQNL QFSKINQQNQ 480 QVGQIQQQPS SGWPQQQPLQ QILPSSVNPV NNGVAPNQIP NQNSQQTAMY SQQLQQQQLL 540 TGNTQMQQNV PLANKITLPM TSLPQDMQFQ QQIEQPSSLL QRPQQQQTQM QQTQPQFLQP 600 VSTQKPQVQQ TSQPSLSEHQ LQMQILQKLQ QQQQQMSSPL SSFWEPSFPQ QQQALQQNQL 660 PQQLSSTGFT ASTLLQSPQF PVNQLYGQQK STSTVKSHPE PADGAIASCS TSPCTNNMQV 720 SPLNFLNRNQ PGSSTLLDNS VVHPVPNLVP ETRSKSDVQV KNELPSYRGS EQPKYSSTAN 780 DHLDAASSET SYCLDASGQQ NFSLTGLDGD IQSHPRSSLT FTANIDGLTP DALLSRGCDS 840 GKDIQNLLSN YNGNPRDIET EFSSAGINSQ TFGVPNMSFN AGCSNDVAIN EAGVLNSGLR 900 TNQTQCSRTY TKVQKRGSVG RTIDVTRYKG YDELRHDLAR MFGIKGLLED PQRSEWKLVY 960 VDHENDILLV GDDPWEEFVS CVQSIKILSS AEVQQMSLDG DLAPPPAPNQ AFSGTDSGNA 1020 WRGQYDDNSA NSFNR*

Sequence ? help Back to Top

Protein Sequence Length: 1036 aa Download sequence

MKVASNGYMA NPGEGGKILI NSELWHACAG PLVSLPPVGS LVVYFPQGHS EQVAASMQKE  60
ADSIPSYPNL PSKLICRLHS VTLHADTETD EVYAQMTLQP VSNYDQEALL LSEMGLKQSR  120
QPSEFFCKTL TASDTSTHGG FSVPRRAAEK IFPLLDFSMQ PPSQELVAKD LHNQSWTFRH  180
IYRGQPKRHL LTTGWSVFVS SKRLAAGDSV LFIRDEKSQL FLGIRHATRQ QPAISSSVIS  240
SDSMHIGILA AAAHAAANNS PFTIFYNPRA SPSEFVIPLA KYNKAMYTQV SLGMRFRMMF  300
ETEESGVRRY MGTITGIGDL DPVRWKNSQW RNLQVGWDES TAGERPSRVS IWEIEPVVTP  360
FYICPPPFFR PKFSKQPGFP DDDADIENIF KRGMPWIADE FGLKDTSSSI FPGLSLVQWM  420
NMQQNQQFSA NQSGLFPNMV SSANLHGNLG TDDRSKLLNF QSPAFASQNL QFSKINQQNQ  480
QVGQIQQQPS SGWPQQQPLQ QILPSSVNPV NNGVAPNQIP NQNSQQTAMY SQQLQQQQLL  540
TGNTQMQQNV PLANKITLPM TSLPQDMQFQ QQIEQPSSLL QRPQQQQTQM QQTQPQFLQP  600
VSTQKPQVQQ TSQPSLSEHQ LQMQILQKLQ QQQQQMSSPL SSFWEPSFPQ QQQALQQNQL  660
PQQLSSTGFT ASTLLQSPQF PVNQLYGQQK STSTVKSHPE PADGAIASCS TSPCTNNMQV  720
SPLNFLNRNQ PGSSTLLDNS VVHPVPNLVP ETRSKSDVQV KNELPSYRGS EQPKYSSTAN  780
DHLDAASSET SYCLDASGQQ NFSLTGLDGD IQSHPRSSLT FTANIDGLTP DALLSRGCDS  840
GKDIQNLLSN YNGNPRDIET EFSSAGINSQ TFGVPNMSFN AGCSNDVAIN EAGVLNSGLR  900
TNQTQCSRTY TKVQKRGSVG RTIDVTRYKG YDELRHDLAR MFGIKGLLED PQRSEWKLVY  960
VDHENDILLV GDDPWEEFVS CVQSIKILSS AEVQQMSLDG DLAPPPAPNQ AFSGTDSGNA  1020
WRGQYDDNSA NSFNR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein