PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu007432.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 320aa    MW: 35975.8 Da    PI: 4.8541
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu007432.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.6e-11156198754
                  HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   +ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Oeu007432.1 156 LAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 198
                  58*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEFTQENMLD ELIAPKRDSW TSFPTEMNEF LPYGWNFSPF DQTPDLVASN PSLLGLISPQ  60
EFSYSYPVGG SQPFLDTFLA PELESFYQNN RTALTADTEN GEFGFLGNGF EEGMSSYSSV  120
DISQTRANMA VSNIGLCRER KGKGKKIDGQ PSKNLLAERR RRKRLNDRLS MLRSIVPKIS  180
KMDRTSILGD TIDYMKELLG KINKLREEGK DENLNQMANL EDLKPKEIQV RNHPKFEVEK  240
TDQDTRIEIC CAANPGLLLS TIRELESMGL DIQQCVISCF NDFSLQATCC EAAGHRLIIS  300
PEGVKQELFR NAGFGGRLL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158165ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-67bHLH family protein