PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007560.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 192aa MW: 21946.8 Da PI: 9.1458

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007560.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	65.9	7.1e-21	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l++av+ +G++ Wk+Ia t g++R++k+c++rw +yl Oeu007560.1 18 RGAWTPEEDRKLAEAVEIHGPKLWKAIATTTGLNRCGKSCRLRWMNYL 65 89********************************************97 PP
2	Myb_DNA-binding	52	1.6e-16	71	116	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++l+++++k+lG++ W++Ia +++ gRt++++k++w ++l Oeu007560.1 71 RGSMTDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWKSHL 116 899*****************.*****.*********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MALTKVENLR PTKKEINRGA WTPEEDRKLA EAVEIHGPKL WKAIATTTGL NRCGKSCRLR 60 WMNYLRPNIK RGSMTDQEED LILRLHKLLG NRWSLIAGRL PGRTDNEIKN YWKSHLGKKI 120 EKSNRGNSRK EGDSTSEELM REKINSSNFN VTGSDEDSKI SFDLDDFFDF SNENPSTLEW 180 VGKFVEFGGV D*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14750.1	2e-52	MYB family protein