PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007695.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 167aa MW: 18599.4 Da PI: 4.9694

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007695.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.5	8.1e-42	24	124	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrr+C ++Cvlapyfp +p kfa++h++FGasn++kll+ +pe++r da++s+vyeA+ar+rdPvyG++gvi +lq+q+ +l++ela+++ Oeu007695.1 24 PCAACKILRRRCIEKCVLAPYFPPGEPMKFAMAHRVFGASNIIKLLQGVPENQRADAVDSMVYEANARLRDPVYGCTGVICQLQKQVIELETELAKAQ 121 7************************************************************************************************9 PP DUF260 99 eel 101 +++ Oeu007695.1 122 AQI 124 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MEYVGTTAAA TTTSAPPQQV ITSPCAACKI LRRRCIEKCV LAPYFPPGEP MKFAMAHRVF 60 GASNIIKLLQ GVPENQRADA VDSMVYEANA RLRDPVYGCT GVICQLQKQV IELETELAKA 120 QAQISNMKSY EIADFAEFIP GEMLQYHETL IPQQPYDDTN WEPRWI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	1e-56	LBD family protein