PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu007696.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 133aa    MW: 15012.1 Da    PI: 4.6653
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu007696.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26086.15e-2727429101
       DUF260  29 kfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101
                  kf ++hk+FGasn++kll+++pe++reda++s+vyeA+ar+rdPvyG++g i +lq+q+ +l++ela++++++
  Oeu007696.1   2 KFLMAHKVFGASNIIKLLQRIPENQREDAVNSMVYEANARLRDPVYGCAGAICQLQKQVIELQTELAKAQAQI 74 
                  799******************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MKFLMAHKVF GASNIIKLLQ RIPENQREDA VNSMVYEANA RLRDPVYGCA GAICQLQKQV  60
IELQTELAKA QAQILNMNMK SHEITNSADF FPAQMLQYQE ICVPQQLCDN LSSSFSDDNE  120
LRVADNLEPF WS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.15e-37LBD family protein