PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007733.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 262aa MW: 28735.3 Da PI: 7.5046

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007733.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00057	113	135	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H Oeu007733.1 113 YECKTCNRTFPSFQALGGHRASH 135 99**********99999998887 PP
2	zf-C2H2	13.9	0.00016	183	205	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H Oeu007733.1 183 HECSICGSEFSSGQALGGHMRRH 205 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MEMEILEEFT KDQLILKRKR TKQLRPSQSS SPSGGGGEEG GGRGGGNEFR SLVSSPTTTA 60 TSSGISTSTE EDEDMANCLI LLAQSGDKVE KFHSRKFAEM ANITQGKVGI YVYECKTCNR 120 TFPSFQALGG HRASHKKPKS TTDEQRIRKS LPFDEEKKLI INRLSPPPSI QSSNKVDVKL 180 KIHECSICGS EFSSGQALGG HMRRHRTAPN TPSPRIGTDD SEEPRKILAL DLNLPAPPED 240 DHRPDETFLL FSSPALVDCQ Y*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	16	23	LKRKRTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	2e-52	C2H2 family protein