PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu007865.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 225aa    MW: 26265.2 Da    PI: 4.9773
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu007865.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.23.3e-193283556
                 SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                 ++f++eq++ +e++F+++ ++  +++ +LAk+lgL+ rqV +WFqN+Ra++k
  Oeu007865.1 32 RRFSDEQIRSMETMFASETKLEPRKKMQLAKELGLQPRQVAIWFQNKRARWK 83
                 58*************************************************9 PP
2HD-ZIP_I/II114.56.5e-3730121293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  + rr+s+eq++++E++F +e+kLep++K++la+eLglqprqva+WFqn+RAR+k+k+lEkdy+ L ++y++l+++ e+L++e+++L ++l++
  Oeu007865.1  30 NTRRFSDEQIRSMETMFASETKLEPRKKMQLAKELGLQPRQVAIWFQNKRARWKSKKLEKDYNILLTNYNSLASQFETLKNEKQSLDNQLQK 121
                  569**************************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MFDGGEEYWS SADYFTNMNT ESKKKKKIKN TRRFSDEQIR SMETMFASET KLEPRKKMQL  60
AKELGLQPRQ VAIWFQNKRA RWKSKKLEKD YNILLTNYNS LASQFETLKN EKQSLDNQLQ  120
KLNEMVGKSE MEIQCPKHEK SGNRIDGESS DNGKNIESGE FEVLNPSLCL DRSENDSNLK  180
ADYFGLEEET ELMHMVESSD SSLASQENFL DHNSSSYQWW DFWS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61890.15e-58HD-ZIP family protein