PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007880.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 619aa MW: 69881.3 Da PI: 9.2757

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007880.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73	3.5e-23	106	206	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd +++g l++ ++ a+e+ + + + s++l+ +d++g +W++++i+r++++r++lt+GW+ Fv +++L +gD +vF + +++el+ Oeu007880.1 106 FCKILTASDRSTHGGLSILRRDANEClppldMTQATPSQDLVAKDLHGYEWRFRHIFRGQPRRHLLTTGWSTFVASKRLVAGDAFVFL--SGDNGELR 201 99**************************9556667789*********************************************..4489999 PP EEEE- CS B3 94 vkvfr 98 v+v+r Oeu007880.1 202 VGVRR 206 ***98 PP
2	Auxin_resp	89.7	5.1e-30	232	311	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++tk+ F v+Y+Pra s+F++ ++k+++a+++k++vGm fkm+f + +s+e+r +Gt++gv d++p +W++S+WrsLk Oeu007880.1 232 ASHAITTKTLFVVYYKPRA--SQFIIGMNKYLEAVRHKFTVGMHFKMRFKEVESREKRSTGTIIGVGDISP-HWKDSNWRSLK 311 789*************8..9*******************************************99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MVNVPCTGER VYYFPQGHLE QLQASTNQES NKQIPRFNLP SKILCHVFHI QLRAEPETDE 60 VYTQITLHPE PDKNFSNSSK KLTSQTEPTS PDPCPPDPPK QNVRSFCKIL TASDRSTHGG 120 LSILRRDANE CLPPLDMTQA TPSQDLVAKD LHGYEWRFRH IFRGQPRRHL LTTGWSTFVA 180 SKRLVAGDAF VFLSGDNGEL RVGVRRLARQ QSPIPPSIIS SESMHLGVLA SASHAITTKT 240 LFVVYYKPRA SQFIIGMNKY LEAVRHKFTV GMHFKMRFKE VESREKRSTG TIIGVGDISP 300 HWKDSNWRSL KIQWDEPGTE RWSQRVSPWE IEPFVASASI DIAQPATKNK IPRLLDRHPS 360 GTTNTTTSSW GMWAPTSVRN DSPNLFRESE YSKNASVLSI LSDYNSPVSS RTDKDHFLDQ 420 VDKSKKVETT SACRLFGIDL RNNANNISRV EKEVTVPNIT SKCANGVDTM NNRDVLKFSE 480 ERKHVFEVLP NDTQRKQISI TSTRTRTKVQ MEGISVGRAV NLSALEGYDD LITELEKMFE 540 IKGGLRPINK WVIIYTDNEG DVMLVGDDPW PKFCKRVKKI CIYSREEVKK MNPRCLSSTA 600 CAGEGTARSL DSEPKLAE*

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MVNVPCTGER VYYFPQGHLE QLQASTNQES NKQIPRFNLP SKILCHVFHI QLRAEPETDE  60
VYTQITLHPE PDKNFSNSSK KLTSQTEPTS PDPCPPDPPK QNVRSFCKIL TASDRSTHGG  120
LSILRRDANE CLPPLDMTQA TPSQDLVAKD LHGYEWRFRH IFRGQPRRHL LTTGWSTFVA  180
SKRLVAGDAF VFLSGDNGEL RVGVRRLARQ QSPIPPSIIS SESMHLGVLA SASHAITTKT  240
LFVVYYKPRA SQFIIGMNKY LEAVRHKFTV GMHFKMRFKE VESREKRSTG TIIGVGDISP  300
HWKDSNWRSL KIQWDEPGTE RWSQRVSPWE IEPFVASASI DIAQPATKNK IPRLLDRHPS  360
GTTNTTTSSW GMWAPTSVRN DSPNLFRESE YSKNASVLSI LSDYNSPVSS RTDKDHFLDQ  420
VDKSKKVETT SACRLFGIDL RNNANNISRV EKEVTVPNIT SKCANGVDTM NNRDVLKFSE  480
ERKHVFEVLP NDTQRKQISI TSTRTRTKVQ MEGISVGRAV NLSALEGYDD LITELEKMFE  540
IKGGLRPINK WVIIYTDNEG DVMLVGDDPW PKFCKRVKKI CIYSREEVKK MNPRCLSSTA  600
CAGEGTARSL DSEPKLAE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.2	0.0	ARF family protein