PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008093.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 137aa    MW: 15198 Da    PI: 8.9265
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008093.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA73.25.4e-23965158
    CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                 +ep+ VNaKQy++ l  Rq+R k+e ekkl +k +kpylheSR +hA r++RgsgG F
  Oeu008093.1  9 QEPVHVNAKQYHGNLCTRQSRSKVELEKKL-IKVQKPYLHESRYQHASRKARGSGGCF 65
                 69****************************.*************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MILPIEMAQE PVHVNAKQYH GNLCTRQSRS KVELEKKLIK VQKPYLHESR YQHASRKARG  60
SGGCFAKTSD ADTSKETRSD SAISTQSYAL SSSKTLPSES NEMKVLKAEF SCNNDISSVR  120
KQINLSDERE EGCTSN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.11e-29NF-YA family protein