PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008219.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 210aa    MW: 23391.5 Da    PI: 7.758
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008219.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH444e-1454105255
                  HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  +  hn+ E +RR+++Ns ++ Lr+llP  +   + kKls  +++ ++ +YI +Lq
  Oeu008219.1  54 KLDHNASEHNRRQKMNSLYSSLRSLLPAtD---QTKKLSIPATVSRVLKYIPELQ 105
                  678*************************66...8999***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MLAPSPSMFS NMGCFTEDPI SSHEHNNMYT ETKGLESTSF GENGTNLNFI KAKKLDHNAS  60
EHNRRQKMNS LYSSLRSLLP ATDQTKKLSI PATVSRVLKY IPELQKEVDG LIQKKELLSI  120
TSRKEGFIYH ESLRDGSSQS SSTSNVSVRP VGNGEILIQM SSAEVRRISV SEVLKDLEEN  180
GMVLLNASTF QSAGMIFYSM HFQVQFVYI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-42bHLH family protein