PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008246.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 144aa    MW: 15989.2 Da    PI: 4.4561
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008246.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB70.13.8e-222741486
        NF-YB 14 srimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvy 86
                 ++i+k++lP + ++++da++++ ec +efi +++se+++ c re+r+ti+++ +l al +lGf +y+e++ + 
  Oeu008246.1  2 TKIIKEMLPPDVRVARDAQDLIIECCVEFINLISSESNEVCGREERRTIAPEHVLKALQDLGFGEYIEEVYAA 74
                 68******************************************************************98654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MTKIIKEMLP PDVRVARDAQ DLIIECCVEF INLISSESNE VCGREERRTI APEHVLKALQ  60
DLGFGEYIEE VYAAYEQHKL ETVDAVRTGK LSNVAEMTEE QALAEQQRMF AEARARMNGG  120
IAVPKQPEPV PQGPQPPQPS LNT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.41e-73NF-YB family protein