PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008378.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C3H
Protein Properties Length: 132aa    MW: 14791.3 Da    PI: 7.4547
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008378.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH30.56.2e-101437225
                 -S---SGGGGTS--TTTTT-SS-S CS
      zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                 ++++C+f+++ G C++GdrC++ H
  Oeu008378.1 14 DRVNCPFYFKIGACRHGDRCSRLH 37
                 6899******************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MAEHLASIFG TEKDRVNCPF YFKIGACRHG DRCSRLHTKP SISPTILLSN MYQRPDMITP  60
GVDAQGQPID PKAIQEHFEV KPVLGGRIVL DIAIVVLIDV VNMLPKRFTS NMRLNWVCVF  120
FDEGFVNGFE L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44785.13e-32C3H family protein