PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008456.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 285aa    MW: 31675.1 Da    PI: 4.8982
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008456.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.13.1e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rgrWT+eEd++l ++++  G g+W++ ++  g+ R++k+c++rw +yl
      Oeu008456.1 14 RGRWTAEEDQILTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     8*******************************99************97 PP
2Myb_DNA-binding568.9e-1867112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++ eE+e++v++++ lG++ W++Ia +++ gRt++++k++w+++l
      Oeu008456.1  67 RGSMSSEEEEIIVKLHASLGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112
                      8999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MGRAPCCEKV GLKRGRWTAE EDQILTNYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRPDLKRGSM SSEEEEIIVK LHASLGNRWS LIAGHLPGRT DNEIKNYWNS HLSRKIYSFR  120
QTYPNFTSPA KAQGVANKRR GGRTSRSTNV SKSSEQVKEI DVGNAAVAMT SSEKEALSST  180
ISWTEISAVE EVMETIDTPP NNEGMGMLHL DDIIVDSNRI STSDHEERGE GIITDGILPT  240
DNLGFSSGEN GFEWDWESDD AITGGNEVWG LEENTFSWLW DSNG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.19e-78MYB family protein