PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008491.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 283aa    MW: 32045.2 Da    PI: 6.3109
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008491.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.8e-163481148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+  Ed +l+d+++ +Ggg W++ ar+ g++Rt+k+c++rw++yl
      Oeu008491.1 34 KGSWSSNEDSILKDYIAIHGGGGWDALARKSGLRRTGKSCRLRWLNYL 81
                     799*******************************************97 PP
2Myb_DNA-binding49.59.5e-1687130146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+eE++ +++++ ++G++ W+ Ia++++ gRt++++k++w+ 
      Oeu008491.1  87 RGNITPEEQLSIIELHLRYGNR-WAEIAKRLP-GRTDNEIKNYWRV 130
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MHIRTNPKLL ILLNLAMDAK EISSKNEGDK SIRKGSWSSN EDSILKDYIA IHGGGGWDAL  60
ARKSGLRRTG KSCRLRWLNY LNPNVRRGNI TPEEQLSIIE LHLRYGNRWA EIAKRLPGRT  120
DNEIKNYWRV TIKKQAKQLN CDVNSIQFRE IMHYIWLQSI MEEQIHPTSE ANSGSQSCST  180
VTAVSTDFDH INCQKLMTDS EVHQPAFGLV EMNSKANMGF SPEPMADVFP VYSPFSYCFE  240
GIDEIQASIH GGDYSLGYEN SLTISLEDED LWVSTSMGFN QF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.11e-60MYB family protein