PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008492.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 275aa    MW: 31869.6 Da    PI: 4.669
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008492.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.84.6e-172269148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+ +Ed +l+ +v+ +G g W++ ar  g++Rt+k+c++rw++yl
      Oeu008492.1 22 KGPWSSDEDSKLIYYVTIHGEGGWEALARNAGLRRTGKSCRLRWLNYL 69
                     79********************************************97 PP
2Myb_DNA-binding50.93.6e-1675119147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+ T+eE++ +++++ q+G++ W+ Ia++++ gRt++++k++w+++
      Oeu008492.1  75 RGNITPEEQLHIIELHLQYGNR-WTEIAKRLP-GRTDNEIKNFWRTV 119
                      7999******************.*********.***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDAKEIYGNS TAQKEEEITI RKGPWSSDED SKLIYYVTIH GEGGWEALAR NAGLRRTGKS  60
CRLRWLNYLN PNVRRGNITP EEQLHIIELH LQYGNRWTEI AKRLPGRTDN EIKNFWRTVI  120
KKQAKQLKCD VNSVEFRDIL RSIWLPSILK EQMHPKIEAN LESQLNSTVT EVSTDFDNMN  180
CQKLMTESEV HQTGFLPVEM NCQSNKSNVS VLDDFEDVNW YYDCLSEQKF GSEVVYSPFI  240
YGFDGNEIQS EDSLIISLND EDFWDSTLTS FNQF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47190.12e-63MYB family protein