PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008655.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NAC
Protein Properties Length: 159aa    MW: 18471.9 Da    PI: 7.9306
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008655.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.83.9e-142711740128
          NAM  40 ykvePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy....kgrapkgektdWvmheyrl 128
                   +++Pw++  ++++  +ke+y F+k  ++   ++r  r++  g Wk + k+k++ ++++e++g+kk+++f      +++++ ++ +W+m ey+l
  Oeu008655.1  27 SNTDPWEIVGETESfVRKEIYVFTKLVRT---ERRYIRVAGCGSWKGKSKQKSIRNSNSEVIGVKKSFTFKvngnLNQDEQNRNGRWIMTEYTL 117
                  689*****854444356799****99885...5799**********************************986654566777899*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MGSTLPCEKI LDRNLYGENR TPWIIFSNTD PWEIVGETES FVRKEIYVFT KLVRTERRYI  60
RVAGCGSWKG KSKQKSIRNS NSEVIGVKKS FTFKVNGNLN QDEQNRNGRW IMTEYTLEGI  120
SLEGVNHDYA VCRISWDQPK FCVEAERSLI EEMPWNHD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22290.14e-07NAC family protein