PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu008707.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 707aa MW: 79707.8 Da PI: 6.8407

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu008707.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.9	1.9e-23	149	249	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++ +k+a+e+ +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD +vF +++++el+ Oeu008707.1 149 FCKILTASDTSTHGGFSVLRKHATEClpqldMSQTTPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSMFVTSKRLVAGDAFVFL--RDENGELR 244 99**************************9666667779*********************************************..5699999 PP EEEE- CS B3 94 vkvfr 98 v+v+r Oeu008707.1 245 VGVRR 249 ***98 PP
2	Auxin_resp	90.6	2.7e-30	275	354	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F v+ +Pr+ s+F+++++k+++++ +k+svGmR+km+ ++eds+err++Gt+vgv d++p +W++S+WrsLk Oeu008707.1 275 ASHAITTHTLFVVYCKPRT--SQFIIRLNKYLETMCHKFSVGMRVKMKCDEEDSHERRFTGTIVGVGDISP-QWTDSEWRSLK 354 789*************6..9*******************************************99.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MISTTPKYLS LIYLGRISTF RLILLLYVPL VDLCFVGVQS DDLYRELWKL CAGPLMDVPS 60 IGERVYYFPQ GHLEQVGKAS TNQELNQQIP RLNLPSKILC RVCHVHLLAE RDTDEVYAQI 120 TLHPEQDRTE PASPDLCLPE PPRPIVHSFC KILTASDTST HGGFSVLRKH ATECLPQLDM 180 SQTTPTQDLV AKDLHGYEWR FKHIFRGQPR RHLLTTGWSM FVTSKRLVAG DAFVFLRDEN 240 GELRVGVRRL AQQQSYMPPS VISSQSMHLG VLATASHAIT THTLFVVYCK PRTSQFIIRL 300 NKYLETMCHK FSVGMRVKMK CDEEDSHERR FTGTIVGVGD ISPQWTDSEW RSLKIQWDEP 360 ATVQWPERVS PWEIEPFVAS TSVNIAQPAT KIKRLRPLDL PHTGSTTSVE LSHFGNTIEV 420 QANENQAFQF SKEKNLNSST PNNSGFCSSR SHAGGMQPPT SLLNDSLNHF QESIDVNKNV 480 AVRTVLFDYK SPVSSRGSDF LEQVESSKKL ENSSVCRLFG VDLRNNSYNI PPAEKVLPCP 540 NIDVQAPSNR SEADWMKNPD HLKTFKEKQC VLVEGIWKDT PSKQSFASSS RTRIKVQMQG 600 IAVGRAVDLT ALMGYDGLVN ELENMFEIKG ELGPRNKWEV VYTDNEGDMM LVGDDPWPEF 660 CKMVKKICIY SSEEVKKINP KCEFPSSSIE GEGTIASLDS EPKYEA*

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MISTTPKYLS LIYLGRISTF RLILLLYVPL VDLCFVGVQS DDLYRELWKL CAGPLMDVPS  60
IGERVYYFPQ GHLEQVGKAS TNQELNQQIP RLNLPSKILC RVCHVHLLAE RDTDEVYAQI  120
TLHPEQDRTE PASPDLCLPE PPRPIVHSFC KILTASDTST HGGFSVLRKH ATECLPQLDM  180
SQTTPTQDLV AKDLHGYEWR FKHIFRGQPR RHLLTTGWSM FVTSKRLVAG DAFVFLRDEN  240
GELRVGVRRL AQQQSYMPPS VISSQSMHLG VLATASHAIT THTLFVVYCK PRTSQFIIRL  300
NKYLETMCHK FSVGMRVKMK CDEEDSHERR FTGTIVGVGD ISPQWTDSEW RSLKIQWDEP  360
ATVQWPERVS PWEIEPFVAS TSVNIAQPAT KIKRLRPLDL PHTGSTTSVE LSHFGNTIEV  420
QANENQAFQF SKEKNLNSST PNNSGFCSSR SHAGGMQPPT SLLNDSLNHF QESIDVNKNV  480
AVRTVLFDYK SPVSSRGSDF LEQVESSKKL ENSSVCRLFG VDLRNNSYNI PPAEKVLPCP  540
NIDVQAPSNR SEADWMKNPD HLKTFKEKQC VLVEGIWKDT PSKQSFASSS RTRIKVQMQG  600
IAVGRAVDLT ALMGYDGLVN ELENMFEIKG ELGPRNKWEV VYTDNEGDMM LVGDDPWPEF  660
CKMVKKICIY SSEEVKKINP KCEFPSSSIE GEGTIASLDS EPKYEA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.2	0.0	ARF family protein