PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu008780.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 282aa MW: 31737.6 Da PI: 4.7854

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu008780.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.7	1.9e-10	19	84	2	67
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 Wt qe Li+ + +e++ + + ++W+++ +++ + ++r+ +qCk kw+ l ++yk++k Oeu008780.1 19 WTVQESVILINEINAVESEWGGTLPSFQKWQQIVENCNALEVNRTLNQCKRKWDALLNEYKRLKIE 84 **************************************************************9854 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MEEQSGGSRR TRSQAAPDWT VQESVILINE INAVESEWGG TLPSFQKWQQ IVENCNALEV 60 NRTLNQCKRK WDALLNEYKR LKIEGDVGGA NGSLDIEVFR AIDRCVKAKG KKSDSHGTAA 120 EIEVETVAEV QSVMDTDPDS DPEAQGPPTT FFLETGTKKQ GQRMKRQKRK IQRLNPWGYV 180 TSGKIMLEQS SRNEKMYSSA DEESNVETKE ETLAQILREN AMQVNAILEG NLAEDVEYRL 240 ADLKNMDAVQ IDFARRQGDK LIDHFGKISD ILNQLCDLVR Q*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	82	KRKWDALLNEYKRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	1e-35	Trihelix family protein