PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008788.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 256aa    MW: 29665 Da    PI: 8.9055
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008788.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.71.8e-0782128455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h + Er RR++ ++++  L +llP       +K +K +iL kA++ I +Lq
  Oeu008788.2  82 KHMISERMRREKHKQSYLALHKLLPVG-----TKSDKNSILHKATKNIEDLQ 128
                  79999********************97.....7999999***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDEFFQLNNF WNMEWPNEDV LVNTSAFVSY IKQPIGELAS KSHGNESNHR NLNKRMIEFL  60
KTTSTRMRVE TTIETENERN HKHMISERMR REKHKQSYLA LHKLLPVGTK SDKNSILHKA  120
TKNIEDLQNY KEQLERRNSE LEMVLAGKVD ENKLEKALIK LKVAYPASGI DSMLEVLKCL  180
ENTGSKLRAI QSNFSQHEYS ASLEIETKVL SLSLSLSLSL SLSHMIFIFS LPFEPVALKF  240
FFFSELISNH TFFYK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17991RNHKHMISERMRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-40bHLH family protein