PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008903.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 128aa    MW: 14568.6 Da    PI: 9.9308
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008903.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.9e-12254455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
          HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                 +hn++Er RR ++N ++  Lr llP  s+ +sk+  s  +i+ ++ +YI +L+
  Oeu008903.1  2 NHNANERIRRMKLNASYLALRALLPDYSRSRSKRrWSAPAIVDRVLKYIPDLE 54
                 8*************************777777777**************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MNHNANERIR RMKLNASYLA LRALLPDYSR SRSKRRWSAP AIVDRVLKYI PDLENEIETL  60
KLKKQNYITQ SEESAEISPA QNSQQITGSG TTVSKLEDEQ GICIKSASTL HVSQTRFCYH  120
LHIQPKL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13035RSRSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71200.15e-20bHLH family protein