PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008954.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 198aa    MW: 22118.6 Da    PI: 9.5851
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008954.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA99.14.5e-31106160358
    CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  p++VNaKQy++Il+RRq+Rak+e+++k+  ksrkpylheSRh hA+rR Rg+gGrF
  Oeu008954.1 106 PVFVNAKQYHGILRRRQSRAKAESKHKV-VKSRKPYLHESRHLHAVRRVRGKGGRF 160
                  9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MTSSIHSLSD NSEADEQQKH AEPQVQSNVM SYTGIALPNM NYATSTQLGA ENAVAQTPYL  60
YSDPYYRSIF PPYDAQPYPA QPMVHHQLMG IQQAGLPLPS DAVEVPVFVN AKQYHGILRR  120
RQSRAKAESK HKVVKSRKPY LHESRHLHAV RRVRGKGGRF KKKSENQQQE VESGEESQAN  180
FNLNSDKKDP SSLESAS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.27e-48NF-YA family protein