PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu009082.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 209aa    MW: 22123.6 Da    PI: 8.7661
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu009082.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.11.6e-39371381101
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 
                  +C aCk+lrrkC ++C++ap+f ++q +++fa+vhk+FGasnv+kll+++p ++r+da+ ++ yeA+ar++dPvyG+v++i +lqqq+ +l++el+++
  Oeu009082.1  37 PCGACKFLRRKCISGCIFAPHFGSDQgAARFAAVHKVFGASNVSKLLSHIPANRRHDAVVTISYEAQARLSDPVYGCVSTIIALQQQVTSLQEELSVV 134
                  7***********************9989*********************************************************************9 PP

       DUF260  98 keel 101
                  +++l
  Oeu009082.1 135 QTQL 138
                  9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MDGSQGDGTS DNRRKGSGKR SAGQAETAAG ALALNAPCGA CKFLRRKCIS GCIFAPHFGS  60
DQGAARFAAV HKVFGASNVS KLLSHIPANR RHDAVVTISY EAQARLSDPV YGCVSTIIAL  120
QQQVTSLQEE LSVVQTQLMN SRFAMVNALQ NSSSQQQQQQ HVAVLQPAYS NTSSASNNNL  180
ISINNFSSAS NFEQTAAPSN NFEPFQAQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03760.12e-69LBD family protein