PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu009109.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 285aa    MW: 32518.4 Da    PI: 7.9171
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu009109.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS105.95.4e-33212402235
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  ++lL +  ea+++g++el +++++ ++e ++p+g+ ++Rla+ +    ++               +  ++++s++ ++a+ +f++  P+ kf+h+taN
  Oeu009109.1  21 RHLLSAYGEAMENGHKELSTEIVKSIREKSNPQGTILERLAFNLFHSKESE-------------GEYLRQESSKNIMKAFIVFYQSLPYGKFAHFTAN 105
                  7999999**********************************9765433322.............222333347889999999**************** PP

         GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  +aIl+a+  + +++HiiDfd+++G+QWp+ ++a++ +     slR T ++  +++  s    e t++ L + A++ g++++++     ++edl     
  Oeu009109.1 106 SAILQAMPDDiKTIHIIDFDVGEGIQWPPVFEAISHK---GKSLRFTSLKLDDKSirSPWDFEGTKKWLYDHARQSGLKLQIEET---SIEDLASGLT 197
                  *******9999************************97...457*******98888889999**********************95...5666655555 PP

         GRAS 195 rvkp....gEalaVnlvlqlhrlldesvsleserdevLklvksls 235
                  r+k+    +E l+ n++++l ++   +   +s+ +++Lkl  +l 
  Oeu009109.1 198 RMKKmgrgKEWLVFNCMIRLPHMA--RRRRRSHVTDFLKLAEELL 240
                  55555568***************9..5555566799*99998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDMSLTYPGD EMEIDNQLSF RHLLSAYGEA MENGHKELST EIVKSIREKS NPQGTILERL  60
AFNLFHSKES EGEYLRQESS KNIMKAFIVF YQSLPYGKFA HFTANSAILQ AMPDDIKTIH  120
IIDFDVGEGI QWPPVFEAIS HKGKSLRFTS LKLDDKSIRS PWDFEGTKKW LYDHARQSGL  180
KLQIEETSIE DLASGLTRMK KMGRGKEWLV FNCMIRLPHM ARRRRRSHVT DFLKLAEELL  240
ANGGASAEIV LLVMEKHKIA QELIQVIVHS STNTQGIMKP NLNH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216226RLPHMARRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-14GRAS family protein