PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu009149.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 628aa MW: 70978.6 Da PI: 5.2982

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu009149.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.6	6.9e-11	433	480	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+h Er+RR++iN++f L +l+P+ +K++K+++L +++e +++L+ Oeu009149.1 433 RNHVLSERKRREKINERFLILGSLVPSG-----GKVDKISVLDRTIERLRELE 480 579999******************98.....8***********999985 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MENQTQEEVP ENLNKQLALA VRSIQWSYAI FWSISSKQPG VLKWGDGYYN GDIKTRKTVQ 60 AEELNADQLG LQRSEQLREL YSSLSAGETN PQAKRPTAAL SPEDLTDAEW YYLVCMSFVY 120 NVGQGLPGRT LAKNRTVWLC NAHRADTKVF SRSLLAKAKC INPVVCFPHL GGVVELGATE 180 LVLEDKKLIQ NLKTSFLEFP YPIVSKIPDN ARNNNGLIYH QINMPETSFN QHVEYPEVNN 240 CSPDNGSNDF GAKQLNEELN MVEDIDGEAG QMQSWQFMDD EISNCVNNST NSSDCISQTC 300 DNPEDIVPVS NGKKVTHNEM HEAQETNQQK LNSSESRGED IHYQSVLSNL LKSSQQLILG 360 PYFSNSNKES SFISWRKDRL SSSQIPQTGT PQRLLKKVLI EVARMHENCR LESGKCDGKR 420 DSLSKPEIEE IDRNHVLSER KRREKINERF LILGSLVPSG GKVDKISVLD RTIERLRELE 480 KRVEELESHR DVDMLESRTR SKPYDAIERT SDNYGTNKNG ISKKSLTNKR KACDMEEPRS 540 NSGCSLSRDS STDNITVNVV DKDVLIEMRC LWRENVLLEV MEAISKLHLD FQSVRSSNTD 600 GILSLTIKSQ VCSLHLENYP FGDVEDP*

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MENQTQEEVP ENLNKQLALA VRSIQWSYAI FWSISSKQPG VLKWGDGYYN GDIKTRKTVQ  60
AEELNADQLG LQRSEQLREL YSSLSAGETN PQAKRPTAAL SPEDLTDAEW YYLVCMSFVY  120
NVGQGLPGRT LAKNRTVWLC NAHRADTKVF SRSLLAKAKC INPVVCFPHL GGVVELGATE  180
LVLEDKKLIQ NLKTSFLEFP YPIVSKIPDN ARNNNGLIYH QINMPETSFN QHVEYPEVNN  240
CSPDNGSNDF GAKQLNEELN MVEDIDGEAG QMQSWQFMDD EISNCVNNST NSSDCISQTC  300
DNPEDIVPVS NGKKVTHNEM HEAQETNQQK LNSSESRGED IHYQSVLSNL LKSSQQLILG  360
PYFSNSNKES SFISWRKDRL SSSQIPQTGT PQRLLKKVLI EVARMHENCR LESGKCDGKR  420
DSLSKPEIEE IDRNHVLSER KRREKINERF LILGSLVPSG GKVDKISVLD RTIERLRELE  480
KRVEELESHR DVDMLESRTR SKPYDAIERT SDNYGTNKNG ISKKSLTNKR KACDMEEPRS  540
NSGCSLSRDS STDNITVNVV DKDVLIEMRC LWRENVLLEV MEAISKLHLD FQSVRSSNTD  600
GILSLTIKSQ VCSLHLENYP FGDVEDP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	439	444	ERKRRE
2	440	445	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-175	bHLH family protein