PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu009563.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 184aa MW: 20525.7 Da PI: 8.3198

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu009563.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	64.1	2.8e-20	34	79	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd++l++ v+++Gg++W++I+++++ gR++k+c++rw + Oeu009563.1 34 KGPWSAEEDQILIRMVERYGGRNWSLISKYVN-GRSGKSCRLRWCNQ 79 79****************************.*********985 PP
2	Myb_DNA-binding	57.2	3.9e-18	88	130	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++++Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ Oeu009563.1 88 PFSADEDETILAAHAEYGNR-WATIARLLP-GRTDNAVKNHWNST 130 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MDPFYRCTSS VTSASSSDSS SESSLSQRNS ERVKGPWSAE EDQILIRMVE RYGGRNWSLI 60 SKYVNGRSGK SCRLRWCNQL SPTVEHRPFS ADEDETILAA HAEYGNRWAT IARLLPGRTD 120 NAVKNHWNST LKRKYQHKQV VEKSTDSTVN VASGSRMCSV SNDFDEEYDP MTALSLAPPG 180 LGR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	2e-60	MYB family protein