PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu009616.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family SBP
Protein Properties Length: 259aa    MW: 28964.3 Da    PI: 9.3935
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu009616.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP129.71.1e-40170246177
                  --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
          SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                  +Cq+egC+a+l++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh+lsefD++krsCr+rLa+hn+rrrk+q
  Oeu009616.2 170 RCQAEGCSANLAHAKHYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHMLSEFDNGKRSCRKRLADHNRRRRKSQ 246
                  6**************************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MLEYEWANPL STIMLSSEGT VQESNQNRQI FYPYSATLTA AETATFFNPN PHFITTATSQ  60
HQHPFHHTET LNSNTQLTNL YDPRVYGSAS ASSYPAEASM LGLEPDTPTG FTLMPKSEPV  120
VGRVDFNSSA SRLGLNLGGR TYFASSEGDS VNRLYRPFRE IDPGLVNSPR CQAEGCSANL  180
AHAKHYHRRH KVCEFHSKAS TVITAGLTQR FCQQCSRFHM LSEFDNGKRS CRKRLADHNR  240
RRRKSQLSNQ KLISKVSA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.18e-66SBP family protein