PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu009619.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 241aa    MW: 26499.3 Da    PI: 6.699
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu009619.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.71.6e-18151185135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C++C t kTp+WR gp g+ktLCnaCG++y++ +l
  Oeu009619.1 151 CTHCSTEKTPQWRTGPMGPKTLCNACGVRYKSGRL 185
                  *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDVYGVPGTD DLLDLSNDEI FSATIHSDLH CHASSSAAAA STARCFDAPT ANYSDFPDVF  60
CVHSEDVAEL EWLSKYMDDS ITDFPSNSIT SAEAAFCGGS RNIRSRSFTS TNAAASGTTA  120
WSSPSPPNNN VNQRESLINR GKENTEKARR CTHCSTEKTP QWRTGPMGPK TLCNACGVRY  180
KSGRLVPEYR PAASPTFVLT QHSNSHRKVL ELRRQKELLR HQQLQSQGCN DITFRFDDVI  240
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.11e-61GATA family protein