PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu009940.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HB-other
Protein Properties Length: 138aa    MW: 15705.7 Da    PI: 5.8754
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu009940.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox34.34.1e-11453655
                 S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
     Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55
                 +f+k q+++L+++Fe++ ++++e++ +L + +gL+ +q+  WF  +Ra +
  Oeu009940.1  4 RFEKCQIDILKSAFEESENLTREKKVDLVRTTGLDMEQIASWFNRKRACK 53
                 699****************************************9999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MAKRFEKCQI DILKSAFEES ENLTREKKVD LVRTTGLDME QIASWFNRKR ACKRARKSIG  60
DLERNNADLQ LALEESREKE AELQKKLNES KQREAELEAE NQSLKQSLAI SGGDMRFDSV  120
LGFAADLHGV DDHILRP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.21e-06HD-ZIP family protein