PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu009977.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 647aa    MW: 73220.4 Da    PI: 6.8672
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu009977.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.72.3e-23109209198
                  EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                  f+kvlt sd++++g +++ +k+a+e+       +++  s++l+ +d++g +W +k+iyr+k++r++lt+GW+ Fv +++L +gD++vF   +  ++el
  Oeu009977.2 109 FCKVLTASDTSTHGGFSVLRKHANEClppldmTLQT-PSQELVAKDLHGMEWHFKHIYRGKPSRHLLTTGWSTFVTSKRLVAGDSFVFL--RGVNGEL 203
                  99****************************975555.4569************************************************..4489999 PP

                  EEEEE- CS
           B3  93 vvkvfr 98 
                  +v+v+ 
  Oeu009977.2 204 CVGVRH 209
                  **9986 PP
2Auxin_resp101.11.5e-33235313182
   Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                  a+h+++tk+ F v+Y+Pr+  s+F++ ++k+++al++ + vGmRfkm+fe eds+e+r+sGt++gv+d++p +W++SkWrsL
  Oeu009977.2 235 ASHSVATKTLFVVYYKPRT--SQFIIGLNKYLEALNHGFRVGMRFKMHFEVEDSPEKRFSGTITGVEDISP-HWKDSKWRSL 313
                  6899**************6..9***********************************************99.*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 647 aa     Download sequence    
MNERVYYFPQ GHMEQLEASI NQELNQRIPV VNLPSKILCS VMNIQLLKIL FGFMFIVSGS  60
LFYITDNPAE QETDEVYAQI TLMPEVEQTE PKSLDPCPPE PPRPTVHSFC KVLTASDTST  120
HGGFSVLRKH ANECLPPLDM TLQTPSQELV AKDLHGMEWH FKHIYRGKPS RHLLTTGWST  180
FVTSKRLVAG DSFVFLRGVN GELCVGVRHH VCQQSSMPSS VISSQSMHLG VLATASHSVA  240
TKTLFVVYYK PRTSQFIIGL NKYLEALNHG FRVGMRFKMH FEVEDSPEKR FSGTITGVED  300
ISPHWKDSKW RSLMVQWDEP ASIPRPERVS PWEIEPFVAS VPTSLVQPLA AKNKRPRSHI  360
EVRVPENPSA ASAVWNPSHD SHKVMGVLEE KRSEQIDASA TLIKNRTDDT FGTNVEGDWL  420
SFPRINSCLN KFSEETEESR SDSAWSILSN HSTPNSRKQS NTLISCLNDG RKLHTSATCR  480
LFGIDLKSPS MLEKCFLKSV DIPSDVSEGC IPNQLLRLQA PIKEVRSRQN HSTRSCTKVQ  540
MQGVAVGRAV DLTVLKGFDE LLSELEEMFE IKGELWHRHK WEIVFTDDEG DMMLMRDYPW  600
LEFCDKVQRI FIYSTQEVKK MRARSNLHLS STDNERGGFN LEVGGD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein