PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010023.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 675aa MW: 75040.9 Da PI: 6.8293

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010023.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76	4.3e-24	123	224	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f k+lt+sd+++ g +++p+ +ae++ +++ + t+ +d +g +W++++iyr++++r++lt+GW++Fv++++L +gD++vF+ + +++ Oeu010023.1 123 FAKTLTQSDANNGGGFSVPRYCAETIfprlnysAEPPVQ--TIFAKDVHGGTWKFRHIYRGTPRRHLLTTGWSNFVNQKKLLAGDSIVFY--RAENGD 216 89**************************986445444..8********************************************..348888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 +v+++r+ Oeu010023.1 217 IRVGIRRA 224 9**996 PP
2	Auxin_resp	115.4	4.9e-38	286	369	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eFvv++++v++a++v++ +GmRfkmafetedss++++ +Gtv++v+ dp++WpnS+Wr+L+ Oeu010023.1 286 AANLAANGQPFEVVYYPRASTPEFVVRASSVRDAMRVQWYAGMRFKMAFETEDSSRISWfMGTVSSVQVEDPIHWPNSPWRLLQ 369 7899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MIDIMHSVNK PMNQVEKYLD THLWHACAGG MVQMPPVNSK IYYFPQGHAE HAHKNVDLWG 60 LSKISPFIPC RVSSIKYLAD AETDEVYSKI GLVPLRGNDG DGDDEYGLLG FDKNDEKEKS 120 NSFAKTLTQS DANNGGGFSV PRYCAETIFP RLNYSAEPPV QTIFAKDVHG GTWKFRHIYR 180 GTPRRHLLTT GWSNFVNQKK LLAGDSIVFY RAENGDIRVG IRRAKRGIGG GPEVSSGWNT 240 GDSNSASSMF RGFSGFLCEN GKLAMANVKK GNGEMEKVKA ESVIEAANLA ANGQPFEVVY 300 YPRASTPEFV VRASSVRDAM RVQWYAGMRF KMAFETEDSS RISWFMGTVS SVQVEDPIHW 360 PNSPWRLLQV TWDEPDLLQN GKRVNPWLVE LVSNMPAIHL SPFSPPRKRS RLPQPPEFPM 420 VGQLQVPSLL SNTLILSSPS CFLQHNISAG IQGARHAQFG SSLLDLHVKN LQPGLHLFES 480 NKLDNPIVNP IFDSISCLPI TVGNSTQNLK LDNETQKPVF LLFGQPILTE QQISQSCSLD 540 NQENTANLSN GSGSAVIQNC PQETSLDEQF PRFKDQKLDF GLATGQCKVF MESEDIGRTL 600 DLSVFHSYEE LYKKLAEMFG MEKTEMLSNV LYSDAVGTTK NARDETFSDL MKNAKRLTIL 660 RDTGSDNLGS SIRS*

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MIDIMHSVNK PMNQVEKYLD THLWHACAGG MVQMPPVNSK IYYFPQGHAE HAHKNVDLWG  60
LSKISPFIPC RVSSIKYLAD AETDEVYSKI GLVPLRGNDG DGDDEYGLLG FDKNDEKEKS  120
NSFAKTLTQS DANNGGGFSV PRYCAETIFP RLNYSAEPPV QTIFAKDVHG GTWKFRHIYR  180
GTPRRHLLTT GWSNFVNQKK LLAGDSIVFY RAENGDIRVG IRRAKRGIGG GPEVSSGWNT  240
GDSNSASSMF RGFSGFLCEN GKLAMANVKK GNGEMEKVKA ESVIEAANLA ANGQPFEVVY  300
YPRASTPEFV VRASSVRDAM RVQWYAGMRF KMAFETEDSS RISWFMGTVS SVQVEDPIHW  360
PNSPWRLLQV TWDEPDLLQN GKRVNPWLVE LVSNMPAIHL SPFSPPRKRS RLPQPPEFPM  420
VGQLQVPSLL SNTLILSSPS CFLQHNISAG IQGARHAQFG SSLLDLHVKN LQPGLHLFES  480
NKLDNPIVNP IFDSISCLPI TVGNSTQNLK LDNETQKPVF LLFGQPILTE QQISQSCSLD  540
NQENTANLSN GSGSAVIQNC PQETSLDEQF PRFKDQKLDF GLATGQCKVF MESEDIGRTL  600
DLSVFHSYEE LYKKLAEMFG MEKTEMLSNV LYSDAVGTTK NARDETFSDL MKNAKRLTIL  660
RDTGSDNLGS SIRS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein