PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010116.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 490aa MW: 54299.4 Da PI: 6.5246

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010116.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40	7.2e-13	343	389	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Oeu010116.1 343 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 389 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MVEGVLGSEA TEYFVWSASN NVLSEFTGLS GDLGVLQGLC KIVEGSDWTY AIYWKVAKSK 60 SCKSALIWGD GHLKESKEGE DKDGISSDSQ KTAEGDRKKL VLLKILACFG RSNNDKMVAK 120 LDRVSDVEMF YLTSMYFAFP FDKPSIPSQS FNSGRSIWVS DVKSCLEHYQ SRSYLAKSAH 180 LETVAFIPLK SGVVEIGSIN SIPEDQNVIK LAKSIVCKPN SIQPKVNPKI FGQELSLGGS 240 KSGPISINFS PKMEDDSGFS SEPYDVQIGS ARVYGNSSNG HHSDEGEAKL FPQMNQIIVR 300 GSNAQDMVSS MDQTIEDSLL LGDDRKPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY 360 ALRAVVPNIS KMDKASLLGD AIAYITDLQT KIRILEAEKE MVSNMQKNDD IPEMDFYERH 420 NDAIVRVKFP LDSHPVSRVV KTLREHQAVV QESNVSISDT GQVVHTFSLE TLGDTAEQLK 480 EKLTSALSK*

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MVEGVLGSEA TEYFVWSASN NVLSEFTGLS GDLGVLQGLC KIVEGSDWTY AIYWKVAKSK  60
SCKSALIWGD GHLKESKEGE DKDGISSDSQ KTAEGDRKKL VLLKILACFG RSNNDKMVAK  120
LDRVSDVEMF YLTSMYFAFP FDKPSIPSQS FNSGRSIWVS DVKSCLEHYQ SRSYLAKSAH  180
LETVAFIPLK SGVVEIGSIN SIPEDQNVIK LAKSIVCKPN SIQPKVNPKI FGQELSLGGS  240
KSGPISINFS PKMEDDSGFS SEPYDVQIGS ARVYGNSSNG HHSDEGEAKL FPQMNQIIVR  300
GSNAQDMVSS MDQTIEDSLL LGDDRKPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY  360
ALRAVVPNIS KMDKASLLGD AIAYITDLQT KIRILEAEKE MVSNMQKNDD IPEMDFYERH  420
NDAIVRVKFP LDSHPVSRVV KTLREHQAVV QESNVSISDT GQVVHTFSLE TLGDTAEQLK  480
EKLTSALSK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	325	333	RKPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16430.1	1e-142	bHLH family protein