PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010178.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 186aa    MW: 20500.1 Da    PI: 8.7355
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010178.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260146.38.7e-4691081100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv kll++l++++reda++sl+yeAe+r+rdPvyG+vgvi+ lq+ql+ql+++l ++k
  Oeu010178.1   9 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELQPQQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQTDLRYAK 106
                  7**********************************************************************************************999 PP

       DUF260  99 ee 100
                  +e
  Oeu010178.1 107 SE 108
                  87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MASSSSNSPC AACKFLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV AKLLNELQPQ  60
QREDAVNSLA YEAEMRLRDP VYGCVGVISL LQHQLRQLQT DLRYAKSELS KYQNLGMTGH  120
GLIAAATHHH SGINLIGSGA SSRDHHFHHR FFPGNPQQII RAFDGNNSYD ASSILFSQFP  180
TGDGK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.34e-67LBD family protein