PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010189.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family SBP
Protein Properties Length: 122aa    MW: 12603.3 Da    PI: 10.1536
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010189.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP55.41.6e-1779121143
                  --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE- CS
          SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfC 43 
                  +CqvegCeadls ak  ++rhk+C +hsk+p+v+v+gleqrfC
  Oeu010189.1  79 RCQVEGCEADLSGAKANYSRHKMCGTHSKSPKVIVAGLEQRFC 121
                  6****************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MELGSASASS SSSSTSGGSE SLNGFKFGKK IYFEDVGVGV QDKFGGGPPS LPPKATGLPP  60
PSPAKKRRRS MVQSGQPPRC QVEGCEADLS GAKANYSRHK MCGTHSKSPK VIVAGLEQRF  120
C*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57920.12e-19SBP family protein