PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010224.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 243aa    MW: 26599.8 Da    PI: 9.3439
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010224.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.18.6e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +l+ +++++G g+W++ + + g++R++k+c++rw +yl
      Oeu010224.1 14 KGPWTPEEDHKLLAYIQEHGHGSWRALPPKAGLNRCGKSCRLRWINYL 61
                     79********************************************97 PP
2Myb_DNA-binding56.56.5e-1867111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++ +E++ +++++++lG++ W+tIa++++ +Rt++++k++w+++
      Oeu010224.1  67 RGKFSSQEEQTIIQLHALLGNR-WSTIAKHLP-KRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MSRSQCCGKV GIRKGPWTPE EDHKLLAYIQ EHGHGSWRAL PPKAGLNRCG KSCRLRWINY  60
LRPDIKRGKF SSQEEQTIIQ LHALLGNRWS TIAKHLPKRT DNEIKNYWNT HVKKRLSKLG  120
IDPWERARLE AEARLARQSK LHSNSFKVNP LNSPELITSA GKSGGGASMA VLGGEMEPTP  180
STYSYSDDAP PMSAGENSTK FVERFSGNES LSGSGGKPDV GSDGGSGGSG GTDYYEDNEL  240
LE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.17e-77MYB family protein